Lab Documents
Genes Implicated in Human Diseases
- Disease Type links send you to NCBI decriptions of the disease. From here you can access links to NIH-CancerNet, American Cancer Society, and U.Penn's Oncolink. Some diseases were found by searching the Swiss-Prot or Entrez databases for "human & disease". These don't have links to NCBI. Eventually, they will link to a description of the disease elsewhere. If this is blank, it means the line describes a gene also implicated in the disease for the line above it.
- Gene Name has information about the gene, its protein product, and possible functions. Some of these fields say "same as the gene above". This refers to the fact that some genes cause more than one disease, due to different types or placements of mutations.
- Location links send you to NCBI chromosomal maps. Unmapped genes are blank. (Also blank are the genes found by searching Entrez and SwissProt -- these will be filled in later.)
- Accesssion # links send you to NCBI-Entrez protein sequences. From here you can access FASTA, DNA, Medline, Related sequences, and cross refs to similar sequences. If this field and the Swiss Prot # field are blank, it means the gene hasn't been sequenced yet. If only the Accession # field is blank, then the gene was found in the Swiss Prot search and hasn't been cross-referenced yet.
- SwissProt # links send to to SwissProt protein entries. From here you can access Medline, submit the sequence for BLAST to EMBnet or NCBI, submit the sequence for modeling, or analyse the sequence with a variety of tools. Some proteins that were in the NCBI database were not found in the Swiss Prot database when searched on name. These will be searched on sequence.
| Disease TypeAsthma | Gene Name
BRCA1; helps repair radiation-induced breaks in double-stranded DNA. |
Location | Accession # | SwissProt # | . |
| BRCA2; helps repair radiation-induced breaks in double-stranded DNA. | Cs 13 | 1161384 | p51587 | ||
| Burkitt Lymphoma | MYC; c-myc oncogene; Cs translocation | Cs 8 | 34816 | p01106 | . |
| Colon Cancer - Familial Hereditary Nonpolyposis Colon Cancer (HNPCC) - Lynch Syndrome | MLH1; repairs mismatches in DNA replication; heterodimer w/ PMS2 | Cs 3 | 631299 | p40692 | . |
| HNPCC | MSH2; repairs mismatches in DNA replication | Cs 2 | 2135744 | p43246 | . |
| HNPCC | PMS1; PMS1 protein homolog 1; DNA mismatch repair protein PMS1 | 1709683 | |||
| Lung Cancer | SCLC1; small cell lung carcinoma | Cs 3 | . | ||
| Malignant Melanoma | CDKN2 - Cyclin-dependent kinase inhibitor 2; regulates DNA synthesis; CDK4 inhibitor p16; aka INK4A/MTS1 | Cs 9 | 2134886 | p42771 | . |
| Multiple Endocrine Neoplasia - MEN Type 1 | MEN1; menin | Cs 11 | 1945387 | . | |
| MEN Type 2, a/b | C-Ret; proto-oncogene tyrosine-protein kinase receptor; RET | . | 547807 | . | . |
| Hirschprung's Disease (HSCR) | smae gene as above | . | . | . | . |
| Thyroid Papillary Caracinomas (PACT) | same gene as above | . | . | . | |
| Neurofibromatosis Type 1 (NF1) - Von Recklinghausen Syndrome | NF1; Neurofibromin; neurofibromatosis-related protein | 548350 | |||
| Watson Syndrome (WS) | same gene as above | ||||
| Leopard (LS) | same gene as above | ||||
| Neurofibromatosis (NF2) | NF2; merlin; schwannomin | Cs 22 | 825719 | p35240 | . |
| p53 Tumor Suppressor | phosphoprotein p53; cellular tumor antigen p53 | Cs 17 | 625300 | p04637 | . |
| Pancreatic Cancer | DPC4; SMAD4; signal transduction of TGF-beta; developmental regulation ? | Cs 18 | 1163234 | . | |
| Prostate Cancer | HPC1; susceptibility locus, not cloned yet. | Cs 1 | N/A | . | |
| RAS Oncogene | HRAS; c-Ha-ras1 p21 protein; transforming protein p21/h-ras-1 (c-h-ras) | Cs 11 | 190891 | p01112 | . |
| Retinoblastoma | RB1; tumor suppressor; regulates DNA replication; Retinoblastoma susceptibility protein; retinoblastoma-associated protein (pp110) (p105-rb); nuclear phosphoprotein w/DNA binding activity | Cs 13 | 292421 | p06400 | . |
| RBL1; Retinoblastoma like protein; PRB1; p107; tumor suppressor ? | p28749 | . | |||
| Von Hippel-Lindau Syndrome | VHL; V h-L tumor suppressor; VHL protein; pVHL; G7 protein | Cs 3 | 2282064 | p40337 | . |
| Asthma | Candidate Asthma gene; possibly cytokine, growth gactor or growth factor receptor | Cs 5 | N/A | . | |
| Autoimmune Polyglandular Syndrome | APS1; APECED; AIRE-1 | Cs 21 | 2696619 | p043918 | . |
| Crohn Disease | Candidate Crohn Disease gene; possibly an inflamatory response gene | Cs 16 | N/A | . | |
| DiGeorge Syndrome | DGS; DGCR2; potential adhesion receptor; IDD; KIAA0163 | Cs 22 | 809022 | p98153 | . |
| Familial Mediterranea Fever | FMF; pyrin | Cs 16 | 2407316 | . | |
| Hemolytic Anemia | ADA1 (see gene below) Level is increased 50-70 times normal | . | . | . | . |
| Severe Combined Immunodeficiency Disease (SCID) | ADA1; Adenosine Deaminase; Adenosine Amino hydrolase | Cs 20 | 113339 | p00813 | |
| SCID | RAG1; activatesV-D-J recombination | 131827 | . | ||
| SCID | RAG2; V(D)J Recombination Activating Protein 2 | 2498830 | |||
| Adrenoleukodystrophy | ALD; probably a transport protein; in ATP-binding transport family; in MDR sub-family | X Cs | 1340149 | p33897 | |
| Atherosclerosis | E; apolipoprotein E; APE | Cs 19 | 178853 | p02649 | |
| Coronary Heart Disease (CAD) | also linked to this gene | ||||
| Dysbetalipoproteinemia (FD) | also linked to this gene | ||||
| Familial Combined Hyperlipidemia (FCHL) | APOA4; Apolipoprotein A-IV; APA4 | 114006 | . | ||
| Familial Hypercholesterolemia (FH) - | LDLR; Low-Density lipoprotein receptor (LDL receptor) | . | 126073 | . | . |
| hypercholesterolemia - lipoproteinemia | apolipoprotein b-100 | 2p24-p23 | 178812 | ||
| ACAT2 deficiency | ACAT2; acyl coenzyme A: cholesterol acyltransferase 2 | 6q25.3-q26 | 3746535 | ||
| Tangier Disease | APOA-1 | . | 113992 | . | . |
| Milano Varient | same gene as above | . | . | . | . |
| Polyneuropathic Amyloidosis Type III (FAP III) - Iowa type variant | same gene as above | . | . | . | . |
| Autosomal Dominant amyloidosis | same gene as above | . | . | . | . |
| Hereditary non-neuropathic systemic amyloidosis - type VIII (Ostertag-type) | same gene as above | . | . | . | . |
| Gaucher Disease | GBA; GDB; glucosylceramidase precursor; acid beta-glucosidase; beta-glucocerebrosidase; D-glucosyl-N-acylsphingosine glucohydrolase; GLCM | Cs 1 | 2144479 | p04062 | |
| Gaucher Disease | Saposin; Sphingolipid activator | 1360694 | |||
| Tay-Sachs Disease | same gene as above | ||||
| Metachromatic Leukodystrophy | same gene as above | ||||
| Infantile neuronal lipofuscinosis | same gene as above (see Batten Disease) | ||||
| Gyrate Atrophy of Choroid and Retina (GACR) | OAT; ornithine ketoacid aminotransferase; mitochonrial matrix; homotetramer | Cs 10 | 1168056 | p04181 | |
| Juvenile Onset Diabetes | IDDM1; near gene for antigens | Cs 6 | |||
| Diabetes Mellitus - Type 2 | human islet amyloid polypeptide (IAPP) gene; inhibits insulin-stimulated glucose utilization and glycogen deposition in muscle, doesn't affect adipocyte glucose metablism; | p10997 | |||
| Diabetes | RAD; GTP-binding protein (RAS associated with diabetes); RAD1; overexpressed in muscle of diabetics | p55042 | |||
| Diabetes | Insulin; INS; insulin precursor | p01308 | |||
| Diabetes | IDDM2 | Cs 11 | |||
| Diabetes | GCK; glucokinase; hxkh; hxkp; hexokinase type iIV; | Cs 7 | q05810 | ||
| Diabetes (Maturity Onset Diabetes of the Young (MODY)) - NIDDM | TCF1; Hepatocyte Nuclear Factor 1-Alpha (HNF-1A); Liver Specific Transcription Factor LF-B1)`; LFB1; Transcription Factor-1; HNFA; | 123436 | |||
| Insulin resistance - noninsulin-dependent diabetes mellitus (NIDDM) | INSR; IR; Insulin Receptor | . | 124529 | . | . |
| Donohue Syndrome - Leprechaunism | same gene as above | . | . | . | . |
| Obesity | OB; Leptin; Lipostatin; secreted signal ? | Cs 7 | 1407583 | p41159 | |
| Obestity | Leptin receptor; OB receptor; OJB-R; LEPR; type I membrane protein; cytokine family | p48357 | |||
| Paroxysmal noctural hemoglobinuria | PIG-A; PI glycan complementation class A; required for normal anchoring by glycosylphosphtidylinositol(GPI); not hereditary - acquired; n-acetylglucosaminyl (GLCNAC) -phosphatidylinositol (PI) biosynthetic protein; | X Cs | 1132481 | p37287 | |
| Phenylketonuria (PKU) | PAH; phenylalanine hydroxylase; PH4H; PHE-4-monooxygenase | Cs 12 | 189937 | p00439;
q16717 |
|
| Hyperphyenylalaninemia (HPA) - (a severe form of PKU) | GCH1; GTP Cyclohydrolase I; GTP-CH-I | 399536 | xxx | ||
| Progressive Dystonia - Dopa-Responsive Dystonia (DRD) | same gene as above | . | |||
| Refsum Disease | PAHX; phytanic acid hydrolase; peroxisomal phytanoyl-CoA alpha-hydroxylase; PTS2-targeted peroxisomal matrix protein; required for metabolism of phytanic acid | Cs 10 | 2564671 | ||
| Duchenne
Muscular Dystrophy &
Becker Muscular Dystrophy |
DMD; Dystrophin; rod-shaped cytoskeletal protein; may have role in anchoring the cytoskeleton to the plasma membrane | X Cs | 181857 | p11532 | |
| Ellis-van Creveld Syndrome | EVC; Chondroectodermal dysplasia | Cs 4 | N/A | ||
| Marfan Syndrome | FBN1; fibrillin 1; multidomain; calcium binding; skeletal, ocular and cardiovascular systems affected | Cs 15 | 544279 | p35555 | |
| Ectopia Lentis (EL) | same gene as above, different mutation gives syndrome w/o cardiovascular involvement | ||||
| Beals Syndrome or
Congenital Contractural Arachnodactyly (CCA) |
FBN2; fibrillin 2; similar to fibrillin 2; mutations gives syndrome similar to Marfan syndrome w/o cardiovascular or ocular involvement | p35556 | |||
| Myotonic Dystrophy | DM; myotonin-protein kinase; MDPK; DM-kinase; DMK; DMPk; MT-PK; intracellular communication ? ; normal=5->27 copies of AGC; diseased=50 copies ->several KB | Cs 19 | 1706450 | q09013 | |
| Alzheimer Disease (AD) | PS1; AD3; PSEN1; presenilin 1; intracellular signaling ?; integral membrane protein; | Cs 14 | 1479974 | p49768 | |
| Alzheimer Disease | PS2; AD4; PSEN2; presenilin 2; STM-2; E5-1; AD3LP; AD5; intracellular signaling ? ; link chromatin to nuclear membrane ? ; integral membrane protein | Cs 1 | 1709858 | p49810 | |
| Alzheimer Disease | A4; Alzheimer's disease amyloid A4 protein precursor; PN-II; APPI; CVAP, AD1; type I membrane protein; found in plaques | p05067 | |||
| Down's Syndrome (Aged) | above protein (A4) is found in these plaques, too. | ||||
| Alzheimer Disease and Down's | Lithostathine 1 alpha; pancreatic stone protein; PSP; pancretic thread protein; PTP; islet of langerhans regenerating protein; REG; regenerating protein I alpha; islet cells regeneration factor; ICRF; | 131433 | |||
| Down's | DCRA; Down syndrome critical region protein A; in PEP8/H58 family. | o14972 | |||
| Down's | DCRB; | Cs 21 | p56555 | . | |
| Down's | DSR1; DSCR1; DSC1 | p53805 | . | ||
| . | . | . | . | . | |
| Amyotrophic Lateral Sclerosis (ALS) - Lou Gehrig's Disease | SOD1; SODC; superoxide dismutase (CU-ZN); important in removing superoxide radicals; cytoplasmic | Cs 21 | 134611 | p00441 | |
| Charcot-Marie-Tooth Disease | PMP-22; MYP2; peripheral myelin protein 22; integral membrane protein; lipid transport proteins in schwann cells ? | Cs 17 | 266803 | p02689 | |
| Dejerine-Sottas Syndrome | Same as above, different mutations lead to similar but more severe symptoms. | see above | see above | ||
| Essential Tremor | ETM1 (FET1) | Cs 3q13 | N/A | ||
| ETM2 | Cs 2 p22-p25 | N/A | |||
| Huntington Disease | HD; IT15; huntingtin; cytoplasmic; microtubule-mediated transport ?; copies of triplet CAG increases with age | Cs 4 p16.3 | 1170192 | p42858 | |
| Niemann-Pick Disease | NPC1; Niemann-Pick Type C Disease; important in cholesterol traffic; mutation leads to build up of cholesterol in neurons. | Cs 18 | 2276463 | ||
| Niemann-Pick Disease | ASM; Sphingomyelin Phosphodiesterase Precursor (Acid Sphingomyelinase); Sphingomyelin accumulates in lysosomes. | 114258 | |||
| Parkinson Disease | SYUA; alpha-synuclein gene; non-A beta component of AD amyloid (NACP); cytoplasmic; neuronal plasticity ?; chaperone ? | Cs 4 | 586067 | p37840 | |
| Spinocerebellar Atrophy - Olivopontocerebellar Atrophy I (OPCA I) | SCA1; ATX1; Spinocerebellar ataxia type 1 protein; ataxin-1; expansion of CAG triplet | Cs 6 | 529662 | p54253 | |
| Williams Syndrome | Deletion of a portion of Cs 7, involving several genes. Including at least: | ||||
| Williams | ELS; ELN; elastin; tropoelastin | Cs 7 | 119297 | p15502 | |
| Williams | LIMK-1; LIK1; LIM domain kinase 1; intracellular signalling ?; cytoplasmic; | see above | 1708820 | p53667 | |
| Williams | LIMK-2; LIK2; cytoplasmic | see above | p53671 | ||
| Fragile X Syndrome | FMR-1; fragile X mental retardation 1 protein; expansion of CGG repeat; cytoplamic and nuclear; interacts with FXR1 and FXR2; | X Cs | 2135128 | q06787 | |
| Fragile X | FMR-2; OX19; | p51816 | |||
| Fragile X | FXR1; RNA binding protein ; cytoplasmic | p51114 | |||
| Fragile X | FXR2; RNA binding protein; cytoplasmic | p51116 | |||
| Ataxis Telangiectasia | ATM; DNA repair; similar to PI-3 kinase | Cs 11 | 1063621 | ||
| Baldness | SRD5A1; S5A1; 3-oxo-5-alpha-steroid 4-dehydrogenase 1; Steroid 5-alpha-reductase; microsomal; differentiation and androgen physiology; regulated by testosterone | Cs 5 | 338476 | p18405 | |
| Pseudovaginal perineoscrotal hypospadias (PPSH) - Pseudohermaphroditism | SRC5A2; highly similar to above gene. | p31213 | |||
| Cockayne Syndrome | CSA; DNA repair of active genes; nuclear ? | Cs 5 | 1362773 | q13216 | |
| Cockayne | CSB; ERCC-6; Excision Repair Protein; interacts with CSA; belongs to SNF2/RAD54 Helicase Family; | 416959 | q03468 | ||
| (this gene is also involved in : xeroderma pigmentosum - group B (XP-b)) | XPB; BTF2-P89; basal transcription factor 2 - 89 KD subunit; TFIIH (subunit of RNA polymerase II); interacts with CSA | 1514597 | p19447 | ||
| Glaucoma | GLC1A | Cs 1 | 2425157 | ||
| Complete Gonadal Dysgenesis - XY females - SWYER Syndrome | SRY; Sex determining region Y gene; TDF; testis-determining factor; *** 3D cyrstal structure avail *** | Y Cs (not in GeneMap) | 548983 | q05066 | |
| Tuberous Sclerosis | TSC1;hamartin; tumor suppressor ? | Cs 9 | 2331281 | ||
| Tuberous Sclerosis | TSC2 locus: tuberin; homologous to GAP3; (Kinesin-like protein KIF1A; Axonal Transporter of Synaptic Vesicles is within locus.) | Cs 16 | 2497523 | p49815 | |
| Waardenburg Syndrome | PAX3; paired box protein; HUP2; | Cs 2 | 1172022 | p23760 | |
| Waardenburg Syndrome - type II (WS@) | ET3; Endothelin-3; vasoconstrictor | 119618 | |||
| Hirschprung's Disease (HSCR) | same gene as above | ||||
| Craniofacial-deafness-hand syndrome (CDHS) | same gene as above | ||||
| Rhabdomyosarcoma-2 (RMS2) | Cs translocation involving above gene. | ||||
| Werner Syndrome | WRN; predicted helicase in RecQ family | Cs 8 | 1280208 | q14191 | |
| Cystic Fibrosis | CFTR; Cystic fibrosis transmembrane conductance regulator; CAMP dependent chloride channel | Cs 7 | 1705762 | p13569 | |
| . | |||||
| Distrophic Dysplasia | DTD; DTDST; sulfate transporter; integral membrane protein; | Cs 5 | 1706534 | p50443 | |
| Long-QT
Syndrome
(type 1-dominant: Romano-Ward Syndrome(RW), type 2-recessive: Jervell and Lange-Nielsen Syndrome (JLN)) |
CIK9; KCNQ1; KCNA9; KCNA8; LQT1; voltage-gated potassium channel KvLQT1; other genes may interact with it, but are only tentaviely mapped. | Cs 11; 3; 6 | 2076880 | ||
| Menkes Syndrome - Kinky Hair Disease | ATP7A; Copper-transporting ATPase 1; copper pump 1; Menkes Disease associated protein; MNK; MC1 | X Cs | 1351993 | q04656 | |
| Occipital Horn Syndrome (OHS) or X-Linked Cutis Laxa | May be caused by same gene as above. | ||||
| Ehlers-Danlos Syndrome | May be caused by same gene as above. | ||||
| Ehlers-Danlos Syndrome type VII-A2 | Procollagen Alpha 2(I) Chain; CA21 | 1705534 | |||
| Osteogenesis Imperfecta Types II (Lethal perinatal), III (Severe) and IV (causes deformed dwarfism if survive) | same gene as above | ||||
| Pendred Syndrome | Pendrin; related to sulfate transporters; PDS | Cs 7 | 2654005 | . | |
| Polycystic Kidney Disease | PKD1; polycystin precursor; integral membrane protein involved in cell-cell and cell-matrix interactions; possible link to microtubule-mediated functions; CPK mouse=model. | Cs 16 | 904223 | p98161 | |
| Wilsons's Disease | ATP7B; WND; PWD; WC1; similar to P-type ATPase copper transport proteins; Long-Evans Cinnamon (LED) rat =model. | Cs 13 | 1947035 | p35670 | |
| Hereditary Hemolytic Anemia | GSH0; GLCLR; GCS light chain; Gamma-ECS; Glutamate-cysteine ligase regulatory subunit; gamma-glutamylcysteine synthetase; first and rate limiting step in de novo glutathione biosynthesis | p48507 | |||
| Hereditary Hemolytic Anemia | GSH1; GLCLC; GCS heavy chain; Gamma-ECS; Glutamate-cysteine ligase catalytic subunit; see above | p48506 | |||
| Hereditary Hemolytic Anemia | TPI; triose phosphate isomerase (TIM) | . | 136060 | . | . |
| Carbohydrate-deficient glycoprotein syndrome II (CDGS2) | GNT2; GLCNAC-T II; MGAT; alpha-1,6-mannosyl-glycoprotein beta-1,2-n-acetylglucosaminyltransferase | q10469 | |||
| Bartter's Syndrome - Gitelman's Syndrome (GS) | TSCC; Thiazide-sensitive sodium-chloride cotransporter (Na-Cl symporter); SLC12A3; | p55017 | |||
| Optic nerve colobomas, vesicoureteric reflux, renal anomalies | PAX2; paired box protein PAX-2; transcription factor ? | q02962 | |||
| Aniridia type II (AN) | PAX6; AN2; Oculorhombin; paired box protein PAX-6; | p26367 | |||
| Peter's anomaly | see above gene | . | |||
| Wagr syndrome | see above gene; also associated with submicroscopic deletions of Cs 11q13. | . | |||
| Wilms tumor | see above gene; also caused by PAX8; paired box protein PAX-8; isoforms 8a/8b and isoforms 8c/8d | q06710
(a/b)
q09155 (c/d) |
|||
| Batten Disease (BD) - Juvenial-onset Neuronal ceroid lipofuscinosis type 3 (JNCL) | CLN3; | q13286 | . | ||
| Machado-Joseph Disease | MJD1; Poly-gln region (normal=14-40 repeats) is expanded (68-82 repeats). | p54252 | |||
| IG MU Heavy Chain Disease | MUCB; BOT | p04220 | |||
| Chronic Granulomatous Disease (CGD) | NCF1; neutrophil cytosol factor 2; neutrophil NADPH oxidase factor 1; P47-PHOX; NCF-47K; | p14598 | |||
| Norrie Disease (ND) | NDP | q00604 | |||
| X-Linked Familial exudative vitreoretinopathy (XLFEVR) | same gene as above | . | |||
| Bloom's Syndrome (BS) | BLM; helicase ? nuclear; | p54132 | |||
| Lambert-Eaton Myasthenic Syndrome | CCB2; Dihydropyridine sensitive L-type calcium channel beta-2 subunit; MYSB; CACNB2; CACNLB2 | q08289 | . | ||
| Hermansky-Pudlak Syndrome | HPS; component of multiple cytoplasmic organelles | q92902 | . | ||
| Kallmann Syndrome | Kal1; KAL; ADMLX; KALIG1; Adhesion molecule-like X-linked; secreted adhesion-like w/ anti-protease activity ? | 125183 ? | p23352 | . | |
| Lupus - Sjogren Syndrome | LA; Sjogren Sydrome type B antigen (SS-b) LA ribonucleoprotein; LA autoantigen | p05455 | . | ||
| Lupus - Sjogren Syndrome | SSA1; Ro52; 52 KD RO protein; Sjogren syndrome type A Antigen (SS-a) | p19474 | |||
| Lupus - Sjogren Syndrome | SSA2; Ro60; 60 KD RO protein; RORNP | p10155 | . | ||
| Lupus - Systemic Lupus Erythematosus | Small Nuclear Ribonucleoprotein SM D1; SNRNP Core Protein D1; SMD1; SMD Autoantigen | . | 134039 | . | . |
| Lowe's Oculocerebrorenal Syndrome | OCRL; involved in inositol phosphate metabolism | q01968 | . | ||
| Treacher Collins Syndrome (TCS) | TCOF1; TCOF; Treacle Protein | q13428 | |||
| Wiskott-Aldrich Syndrome (x-linked) | WASP; WAS; IMD2; regulates lymphocyte and platelet function ? | p42768 | |||
| Wiskott-Aldrich Syndrome (X-linked, so this is not primary genetic defect) | Sialophorin | CS 16 | 338231 | ||
| Von Willebrand Disease (VWD) | VWF | 401413 | |||
| Pseudo-Von-Willebrand Disease - (VWD) | GP1BA | . | 121531 | . | |
| Bernard-Soulier Syndrome (BSS) | same gene as above | . | . | . | . |
| Bernard-Soulier Syndrome | Platelet Glycoprotein IX (GPIX); CD42A | 2822110 | |||
| Familial Amyloidotic Polyneuropathy (FAP) | TTHY; TBPA; TTR; ATTR; Transthyretin; thyroid hormone (thyroxine ?) binding protein; functions to transport from blood to brain ? | 136464 | |||
| . | . | . | . | . | . |
| Senile Systemic Amyloidosis (SSA) | same gene as above | ||||
| Autosomal Dominant Retinitis Pigmentosa (ADRP) | RDS; w/ missense or in-frame deletions in large intradiscal loop between 3rd and 4th tm domains. | ||||
| Progressive Macular Degeneration | same gene as above, w/ missense or in-frame deletions in large intradiscal loop between 3rd and 4th tm domains. | ||||
| Pattern Type Dystrophies: Pattern Dystrophy (PD),
Macular Dystrophy (MD), Adult Vitelliform MD (AVMD), Butterfly Dystrophy (BD), Cone Rod Dystrophy (CRD), Punctata Albescens, Central Areolar Choroidal Dystrophy (CACD), Foveomacular Dystrophy (FD), Bulls-Eye Maculopathy (BEM) |
same gene as above, but with scattered nonsense mutations | ||||
| Retinitis Pigmentosa Digenic (RPD) | same gene as above, but with scattered nonsense mutations | ||||
| Thrombophilia - Recurrent Venous Thrombosis - Purpurs Fulminans | PROC; Autoprothrombin IIa; Vitamin-K dependent protein C; Anticoagulant protein C | 131067 | |||
| Dysprothrombinemia | THRB; Prothrombin; coagulation factor II | . | 135807 | . | . |
| Methylmalonic aciduria (MMA) | MUT; Methylmalonyl-CoA Mutase Precursor MCM | 547946 | |||
| Primary Lactic Acidosis | PDHEI-A Type I; Pyruvate Dehydrogenase E1 Component, Alpha subunit, Somatic Form; ODPA | 129063 | . | ||
| Leigh's Encephalomyelopathy - Leigh's Syndrome | same gene as above | . | |||
| Pompe's Disease - Glycogen Storage Disease (GSD - II) | GAA; Lysosomal Alpha-Glucosidease (Acid Maltase) | 126590 | . | ||
| VonGierke Disease - Glycogen Storage Disease (GSD - IA) | GSD; Glucose-6-phosphatase (G6Pase) | 544361 | |||
| Tarui's Disease - Glydogen Storage Disease (GSD-VII) | 6-phosphofructokinase, muscle type (phosphofructokinase 1); phosphohexokinase; | 125126 | |||
| Leukocytic Adhesion Deficiency (LAD) | ITGB2; Cell Surface Adhsion Glycoproteins LFA-1/CR3/P150,95 Beta-subunit; Integrin beta-2; CD18 Antigen; Complement receptor; | 124966 | . | ||
| Hypoglycemia - Fructose Bisphosphate deficiency (FBPD) | FBP; D-Fructose 1,6-Bisphosphase | 1352403 | . | ||
| Metabolic Acidosis - lactacidemia | same gene as above | ||||
| Hypoglycemia | HADHB; mitochondrial trifunctional enzyme beta subunit (TP-beta); 3-ketoacyl-coA thiolase; acetyl-coA acyltranferase; beta-ketothiolase | 11q22.3-q23.1 | 1706566 | ||
| 3-hydroxydicarboxylic aciduria | same gene as above | ||||
| mild liver dysfunction | same gene as above | ||||
| hyperammonemia | same gene as above | ||||
| . | |||||
| Erythropoietic Protoprophyria (EPP) | HEMZ; Ferrochelatase; protoheme ferro-lyase; heme synthetase | 123052 | . | ||
| Jaundice and Cyanosis | HBG; Hemoglobin Gamma-A and Gamma-G chains | 122761 | . | ||
| beta o-thalassemia | beta-globin | 1066762 | |||
| Hemophilia B | FA9; Coagulation Factor IX; Christmas Factor | 119772 | . | ||
| Hemophilia | F13B; Coagulation Factor XIII B chain; protein-glutamine gamma-glutamyltransferase B chain; transglutaminase B chain | 119721 | |||
| Hereditary Non-Syndromic Sensorineural Deafness (DFNA3 & DFNB1) | GJB2; CXB2; Gap Junction Beta-2; Connexin 26; CX26 | 585020 | |||
| Adrenal Hyperplasia type V (AH-V) | CYP17; Cytochrome P450 XVIIA1 (P450-C17); Steroid 17 alpha hydroxylase/17,20 lyase | 117283 | |||
| X-linked Adrenal Hypoplasia Congenita (AHC) | DAX-1; Orphan Nuclear Receptor | 1706303 | |||
| Hypogonadotrophic Hypogonadism (HH or HHG) | same gene as above | ||||
| Chronic Obstructive Pulmonary Disease | ATT; Alpha-1-Antitrypsin; protease inhibitor; antiproteinase; protects against proteolytic destruction by Human Leukocyte Elastase (HLE) of lower respiratory tract | 1703025 | |||
| Chronic and Acute Respiratory Disease | ALK1; MPI; Antileukoproteinase 1; ALP; HUSI-1; Seminal proteinase inhibitor; secretory leukocyte protease inhibitor; BLPI; Mucos proteinase inhibitor | 113636 | |||
| Chronic Emphysema | same gene as above | ||||
| Infantile Liver Cirrhosis | same gene as above | ||||
| Bleeding Diathesis | same gene as above | ||||
| Marble Brain Disease | CA2; Carbonic Anhydrase II; Carbonate Dehydratase II; CAH2; also causes osteopetrosis, renal tubular acidosis, mental retardation | 115456 | |||
| Maroteaux-Lamy Syndrome - Mucopolysaccharidosis Type VI (MPS-VI) | G4S; ARSB; Arylsulfatase B (ASB) ; N-acetylgalactosamine-4-sulfatase; | 114223 | |||
| Multiple Sulfatase Deficiency (MSD) - metachromatic Leukodystrophy | a decrease in all sulfatase activity - including gene above | ||||
| familial dysalbuminemic hyperthyroxinemia (FDH) - Euthyroid hyperthyroxinemia | ALB; ALBU; Serum albumin | . | 113576 | . | |
| Pseudohypoaldosteronism type 1 (PHA1) | PHA1; SCNEB; Amiloride-sensitive sodium channel beta-subunit; epithelial NA+ channel beta subunit; beta ENAC; non-voltage-gated sodium-channel 1 beta subunit; beta NACH | . | 1710870 | . | |
| Liddle Syndrome | same gene as above | . | . | . | |
| Transmissible Spongiform Encephalopathies - Prion Diseases:
Creutafeldt-Jakob Disease (CJD), Gerstmann-Straussler Syndrome (GSS), Fatal Familial Insomnia (FFI), KURU |
Major Prion Protein Precursor (PRP) ; PRP27-30; PRP33-35C; ASCR | 130912 | . | ||
| Myoglobinuria - exercise intolerance - myopathy | PGAMM; Phosphoglycerate Mutase, muscle form (PGAM_M); BPG-dependent PGAMM; PMGM | . | 130353 | . | |
| Exertional Myoglobinuria | LDH-A; L-Lactate dehydrogenase M Chain (LDH-A); LDHM | 126047 | |||
| Lesch-Nyhan Syndrome | Hypoxanthine-guanine phosphoribosyltransferase (HGPRT); HPRT; HGPRTase; complete lack | . | . | . | |
| Gout | same gene as above, partial lack | . | 123408 | . | |
| Digestive tract cancers | AP3A Hydrolase; AP3AASE; Fragile histidine triad protein; Bis(5'-adenosyl)-triphosphatase; diadenosine-triphosphate hydrolase; dinucleosidetriphosphatase | . | 1706794 | . | |
| Emery-Dreifuss Muscular Dystrophy (EDMD)
|
Emerin; EMD | . | 1706639 | . | |
| Alport Syndrome (similar to canine x-linked hereditary nephritis (HN)) | Collagen Alpha 5 (IV) Chain; Type IV Collagen; | . | 2493785 | . | |
| Limb-Girdle Muscular Dystrophy type 2A (LGMDsA) | CAN3; Calpain p94; large catalytic subunit - calcium-activated neutral proteinase; CANP; p94 protein; muscle-specific calcium-activated neutral protease 3 | 1345664. | . | ||
| Epidermolytic Hyperkeratosis (EHK) - Bullous Congenital Ichthyosiform Erythroderma (BIE) | KRT10; KRT1; K1CJ; Keratin, Type I Cytoskeletal 10; Cytokeratin 10, K10, CK10 | 547749 | |||
| Epidermolysis Bullosa (EB) - simplex (EBS); Junctional (EBJ); Dystrophic (EBD); Koebner (EBS-K); Weber-Cockayne (WBS-WC); Dowling-Meara (EBS-DM) | K2C5; Keratin, Type II Cytoskeletal 5; Cytokeratin 5; K5; CK5; 58KD Cytokeratin; | 125105 | |||
| Epidermolysis Bullosa (EB) - see above | K1CN; Keratin, Type I Cytoskeletal 14; K14; CK14; | 125080 | |||
| Epidermolysis Bullosa Acquisita (EBA) | (caused by autoantibodies to:) COL7A1; Type VII Collagen | . | 1345650 | . | |
| Dystrophic Epidermolysis Bullosa (DEB) - Dominant (DDEB) or recessive (RDEB) | COL7A1; Type VII Collagen | . | . | . | |
| Hallopeau-Siemens DEB (HS-RDEB) | same gene as above | . | . | . | |
| Mitis DEB (M-RDEB) | same gene as above | . | . | . | |
| Cockayne-Touraine DEB (CT-DDEB) | same gene as above | . | . | . | |
| Pasini DEB (P-DDEB) | same gene as above | . | . | . | |
| Barth DEB (P-DDEB) | same gene as above | . | . | . | |
| Pretibial EB (PEB-DDEB) | same gene as above | . | . | . | |
| Nocturnal Asthma | ADRB2; Beta 2 adrenergic receptor | . | 114765 | . | |
| Mevalonicaciduria | MVK; Mevalonate Kinase (MK) | . | 417215 | . | |
| Wernicke-Korsakoff Syndrome (WKS) | TKT; Transketolase (TK) | . | 1729976 | . | |
| LiverDiseases | DRN1; Deoxyribonuclease I Precursor (DNase I) | . | 118919 | . | |
| Gilbert's Syndrome | UDP-Glucuronosyltransferase 1-1; UGT-1A; UGT1-01; Bilirubin Specific isozyme 1; HUG-BR1; | 136729 | |||
| Crigler-Najjar (CN) | same gene as above | . | . | . | |
| GM1-Gangliosidosis | GLB1; GM1; beta-galactosidease; lactase; acid beta-balactosidase; BGAL | . | 114940 | . | |
| Morquio B Syndrome | same gene as above | . | . | . | |
| Acute Hepatic Porphyria | ALADH; Delta-aminolevulinic acid dehydratase; porphobilinogen synthase; | 122833 | |||
| Piebaldism | Mast/stem cell growth factor receptor (SCFR); proto-oncogene tyrosine-protein kinase; KIT; C-KIT; CD117 Antigen | 125472 | |||
| Argininemia | ARGI; Arginase 1; liver-type arginase | 114145 | |||
| Norum | LCAT; phosphatidylcholine-sterol acyltransferase; lecithin-cholesterol acyltransferase; phopholipid-cholesterol acyltransferase | 125993 | |||
| Fish-eye disease | same gene as above | . | . | . | |
| Wolman Disease | Lysosomal acid lipase/cholesteryl esterase (LIPA) | 460143 | |||
| Pelizaeus-Merzbacher Disease | proteolipid protein | 1109632 | |||
| Giant cell arteritis | human leucocyte antigen beta chain DR molecule; HLA-DRB1; DRB1 allele 0701 | 262377 | |||
| Giant cell arteritis | human leucocyte antigen beta chain DR molecule; HLA-DRB1; DRB1 allele 0101 | 262376 | |||
| Vascular Disease | methylenetetrahydrofolate reductase | 945023 | |||
| Glanzmann Thrombasthenia (GTA) | Platelet Membrane Glycoprotein IIIA; GPIIIA; Integrin Beta-3; CD61 | 124968 | |||
| 6-mercaptopurine sensitivity | TPMT; thiopurine S-methyltransferase | 2623564 | |||
| 3-beta-hydroxysteroid dehydrogenase, type II deficiency | 3B-HSD; 3-beta hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase. | 179468 | |||
| Aarskog-Scott Syndrome | FGD1; faciogenital dysplasia; rho/rac guanine nucleotide sxchange factor ? | Xp11.21 | 595425 | ||
| Acute Leukemia | ALL1; MLL; - translocations with 11q23 | 1490271 | |||
| Acute Leukemia | ARP1a,1b,1c - targets for ALL1 | 4q24-q25 | 3078007
3078009 3078011 |
||
| Japanese type acatalasemia | catalase | 11p13 | 1839577 | ||
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Web Master: Carlos Rios


