Academics

Henry Rutgers Honors Thesis Presentations

The Henry Rutgers Scholars Program is both a respected and rewarding undergraduate experience at Rutgers University. The following students from the CABM Structural Bioinformatics Laboratory have participated in the program:

1992
Mr. Mark Olysk
"New Computational Methods for Homology Modeling of Proteins."
1994
Ms. Haicheng Li
"Holology Modeling Using Constrained Molecular Dynamics: Application in Predicting the Three Dimensional Structure on Murine Homeobox Domain MSX-1”
1996
Ms. Staci Michelle Lieberman
"NMR Solution Structure Determination of the Murine Homeodomain MSX-1"
1997
Mr. Shabbar Danish
"Biophysical Studies of CspA, the Major Cold Shock Protein Of E. coli"

Ms. Lisa Seufert
"Expression and Purification of 15N-enriched Alzheimer's Amyloid β-Protein Precursor Kunitz Inhibitor Domain (APP-KI)."
1999
Ms. Alexandra Gardino
"Clusters of Orthologous Groups: Applications in Bioinformatics, Structural Biology, and Structure-Based Functional Genomics." (html)
2000
Ms. Reza Akhtar
"High Throughput Homology Modeling for Structural Genomics." (word, pdf)

Mr. Ram Mani
"Structural Genomics of Conserved Gene Families." (word, pdf)
2002
Mr. Gurmukh Sahota
"Solution NMR structure of the BRCT domain of Thermus thermophilus DNA ligase."
2003
Mr. Marvin Bayro
"AutoProc: Automated processing of protein NMR data through a generalized experimental model in a relational database approach."

Mr. Nadeem Riaz
"Automated analysis of peak patterns in multidimensional nuclear magnetic resonance spectroscopy."

Ms. Zeba Wunderlich
"HOMA, Homology Modeling Automatically, and ZebaView: Two bioinformatics applications for structural genomics."
2004
Ms. Tatiana Borissova
"Protein Stability Measurements Using Hydrogen/Deuterium Exchange, Mass Spectrometry, and NMR Spectroscopy." (pdf)

Ms. Kate Drahos
“Protein expression and folding optimization for high-throughput proteomics” (html, ppt)
2005
Ms. Pavithra Shivakumar
" AutoQF Software for Validation of Protein NMR Structures."
2006
Brian Radvansky
"Media and Construct Optimization of NS1 and ISG15 Proteins for Structural and Functional Biological Studies" (restricted access for doc, ppt)

Henry Rutgers Scholars Program web site: http://hrthesis.rutgers.edu/



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	Academics Henry Rutgers Honors Thesis Presentations The Henry Rutgers Scholars Program is both a respected and rewarding undergraduate experience at Rutgers University. The following students from the CABM Structural Bioinformatics Laboratory have participated in the program: 1992 Mr. Mark Olysk "New Computational Methods for Homology Modeling of Proteins." 1994 Ms. Haicheng Li "Holology Modeling Using Constrained Molecular Dynamics: Application in Predicting the Three Dimensional Structure on Murine Homeobox Domain MSX-1” 1996 Ms. Staci Michelle Lieberman "NMR Solution Structure Determination of the Murine Homeodomain MSX-1" 1997 Mr. Shabbar Danish "Biophysical Studies of CspA, the Major Cold Shock Protein Of E. coli" Ms. Lisa Seufert "Expression and Purification of 15N-enriched Alzheimer's Amyloid β-Protein Precursor Kunitz Inhibitor Domain (APP-KI)." 1999 Ms. Alexandra Gardino "Clusters of Orthologous Groups: Applications in Bioinformatics, Structural Biology, and Structure-Based Functional Genomics." (html) 2000 Ms. Reza Akhtar "High Throughput Homology Modeling for Structural Genomics." (word, pdf) Mr. Ram Mani "Structural Genomics of Conserved Gene Families." (word, pdf) 2002 Mr. Gurmukh Sahota "Solution NMR structure of the BRCT domain of Thermus thermophilus DNA ligase." 2003 Mr. Marvin Bayro "AutoProc: Automated processing of protein NMR data through a generalized experimental model in a relational database approach." Mr. Nadeem Riaz "Automated analysis of peak patterns in multidimensional nuclear magnetic resonance spectroscopy." Ms. Zeba Wunderlich "HOMA, Homology Modeling Automatically, and ZebaView: Two bioinformatics applications for structural genomics." 2004 Ms. Tatiana Borissova "Protein Stability Measurements Using Hydrogen/Deuterium Exchange, Mass Spectrometry, and NMR Spectroscopy." (pdf) Ms. Kate Drahos “Protein expression and folding optimization for high-throughput proteomics” (html, ppt) 2005 Ms. Pavithra Shivakumar " AutoQF Software for Validation of Protein NMR Structures." 2006 Brian Radvansky "Media and Construct Optimization of NS1 and ISG15 Proteins for Structural and Functional Biological Studies" (restricted access for doc, ppt) Henry Rutgers Scholars Program web site: http://hrthesis.rutgers.edu/
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