| Date |
Topic |
Lecturer |
| Jan. 20th |
Course introduction and overview of genomics and proteomics [HTML] [PPT] |
GM + SA |
| Jan. 23rd |
Overview of genomics and proteomics (cont'd) [HTML] [PPT] Reading Assignment 1, Reading Assignment 2 |
SA |
| Jan. 27th | Protein folding [HTML] [PPT] Reading Assignment 1, Reading Assignment 2, Reading Assignment 3 |
SA |
| Jan. 30th |
Tools of bioinformatics: Blast, PsiBlast, DNA sequence databases [HTML] [PPT] Reading Assignment |
GM |
| Feb. 3rd |
Comparative biology based on genomic sequence analysis [HTML] [PPT] Reading Assignment |
GM |
| Feb. 6th |
Conformational properties of proteins [PPT] Reading Assignment |
GM |
| Feb. 10th |
Protein sequence and structure databases [HTML] [PPT] Reading Assignment 1, Optional Reading 1, Optional Reading 2 |
GM |
| Feb. 13th |
Exam I |
|
| Feb. 17th |
Analytical and preparative protein chemistry I [HTML] [PPT] Reading Assignment |
SA |
| Feb. 20th |
Analytical and preparative protein chemistry II [HTML] [PPT] | SA |
| Feb. 24th |
Protein mass spectrometry [HTML] [PPT] Reading Assignment 1 (pp. 438-447) Reading Assignment 2 (pp. 415-419) |
SA |
| Feb. 27th |
Biophysics of amide HD exchange [HTML] [PPT] Reading Assignment 1, Reading Assignment 2, Optional Reading 1, Optional Reading 2, Optional Reading 3 |
GM |
| Mar. 2nd |
Protein NMR spectroscopy I [HTML] [PPT] | GM |
| Mar. 5th |
Protein-protein interactions I [PPT] Reading Assignment 1, Reading Assignment 2, Reading Assignment 3 |
SA |
| Mar. 9th |
Protein NMR spectroscopy II [HTML] [PPT] Reading Assignment |
GM |
| Mar. 12th |
Exam II |
|
| Mar. 16th |
Spring Break |
|
| Mar. 19th |
Spring Break |
|
| Mar. 23rd |
Protein-protein interactions II [HTML] [PPT] Reading Assignment |
SA |
| Mar. 26th |
Enzyme Kinetics I [HTML] [PPT] Reading Assignment |
GM |
| Mar. 30th |
Protein X-ray Crystallography [HTML] [PPT] Reading Assignment |
Dr. Kalyan Das |
| Apr. 2nd |
Enzyme kinetics II |
GM |
| Apr. 6th |
DNA microarrays [HTML] [PPT] Reading Assignment |
SA |
| Apr. 9th |
RNA intereference[HTML] [PPT] Reading Assignment |
SA |
| Apr. 13th |
No lecture |
|
| Apr. 16th |
No lecture | |
| Apr. 20th |
Structure Genomics I + II (double lecture 9:30 am - noon) [HTML] [PPT] Reading Assignment 1, Reading Assignment 2, Reading Assignment 3 |
GM |
| Apr. 23rd |
Student Presentations [Tong, Boone et al 2004(pdf)] [Brooijmans et al 2002(pdf)] [Friedman 2004(pdf)] [Hazbun et al 2003(pdf)] [Jansen et al 2003(pdf)] [Lee et al 2002(pdf)] [Li et al 2004(pdf)] [Liu et al 2002(pdf)] [Matagne et al 1998(pdf)] [Milo et al 2002(pdf)] Kate Drahos, HTP Protein-Protein Interaion Analysis [HTML] [PPT] Dan Kulp, Macromolecular Complexes [HTML] [PPT] |
|
| Apr. 27th |
Student Presentations | |
| Apr. 30th |
Student Presentations |